GROMACS Tutorial Part 6 | MMPBSA & MMGBSA Binding Free Energy Calculations (Step-by-Step)

Welcome to Part 6 of the GROMACS Tutorial Series! In this video, we demonstrate how to perform MM-PBSA (Molecular Mechanics Poisson–Boltzmann Surface Area) and MM-GBSA (Generalized Born Surface Area) calculations using the results of your MD simulations. These methods are widely used to estimate the binding free energy between protein and ligand in molecular dynamics studies. Download Path https://github.com/MaddyList/MMPBSA-M... 📌 Recommended to watch previous parts for foundational knowledge: Part 6: MM-PBSA & MM-GBSA Part 2–5: Protein-Ligand MD Simulations & Analysis Part 1: Installation of Gromacs

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