GROMACS Tutorial Part 2 | Protein-Ligand Complex MD Simulations Step-by-Step
Welcome to Part 2 of the GROMACS Tutorial Series! In this video, we demonstrate the complete workflow for setting up and running Molecular Dynamics (MD) Simulations of a Protein-Ligand Complex using GROMACS. This hands-on tutorial will walk you through key steps from structure preparation to simulation and analysis. the commands can be found on https://github.com/MaddyList/Gromacs.git 📌 Recommended to watch previous parts for foundational knowledge: Part 2–5: Protein-Ligand MD Simulations & Analysis Part 1: Installation of Gromacs
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