Protein-Membrane Simulation Setup | CHARMM-GUI to GROMACS Molecular Dynamics Tutorial

Learn how to set up a protein-membrane simulation using CHARMM-GUI and run it with GROMACS for molecular dynamics. This step-by-step guide covers lipid bilayer preparation, protein insertion, solvation, ion addition, topology generation, and running MD simulations. Perfect for beginners and researchers aiming to explore membrane protein dynamics, lipid interactions, and structural stability in a realistic environment. Includes tips for simulation parameter optimization and analysis. #MolecularDynamics #CHARMMGUI #GROMACS #MembraneSimulation #ProteinDynamics #LipidBilayer #ComputationalBiology #StructuralBiology #Biophysics #MDsimulation #ProteinMembrane #SimulationTutorial ================================================================== Welcome to Omixium! This channel is dedicated to empowering the next generation of scientists with hands-on tutorials, deep dives, and tool walkthroughs in: 🔬 Bioinformatics & Computational Biology 🧠 AI in Drug Discovery & Protein Design ⚗️ Molecular Docking, MD Simulations & Systems Biology 🧬 Single-cell RNA-seq, Multi-omics & NGS Pipelines 👨‍💻 AI Coding for Biology (Claude, Gemini, GPT) 🧪 New videos every week — for scientists, students, coders, and curious minds! --- 🌐 Stay Connected: 🔗 LinkedIn: [Pritam Kumar Panda](  / pritam-kumar-panda  ) 🌍 Website: [https://www.atomodyssey.com](https://www.atomodyssey.com) 📧 Contact: [[email protected]](mailto:[email protected]) 💻 GitHub: [https://github.com/pritampanda15](https://github.com/pritampanda15)