RNA-seq: import raw FASTQ files

This video guide demonstrates how to set up your analysis project on Platforma by importing and organizing your raw sequencing data. We walk you through importing FASTQ files from a remote server, parsing complex filenames to extract sample, lane, and read information, and finally, linking your data to a metadata file. In this video, you will learn how to: Import raw FASTQ files from a remote server directly into your project. Use Platforma's powerful pattern-matching system to automatically parse and group files by sample name, lane, and read (R1/R2). Customize the import pattern to handle complex filenames, such as skipping or renaming specific parts. Correctly group data from multiple sequencing lanes (e.g., L001, L002) for each sample. Import a metadata file (CSV/TSV) and map it to your samples. Prepare your dataset for downstream analysis blocks, such as Cell Ranger. Platforma is a no-code, end-to-end bioinformatics platform designed to empower biologists and immunologists to get from raw data to publication-ready discoveries without coding expertise. ➡️ Explore Platforma: https://platforma.bio ➡️ Read our Documentation: https://docs.platforma.bio/guides/rna...