How to show AlphaFold error estimates with ChimeraX
We take a look at how to show AlphaFold predicted aligned error (PAE) plots to see if domains are packed correctly, and also show how to color by AlphaFold per-residue confidence scores. The PAE plots are in ChimeraX versions from April 2022 (not in version 1.3). More details here https://www.rbvi.ucsf.edu/chimerax/da...
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Evaluating AlphaFold protein-protein binding with ChimeraX
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Foldseek
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AlphaFold - The Most Useful Thing AI Has Ever Done
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Fit an AlphaFold database model to a cryoEM map
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Turing Award Winner: Disagreeing with Google, Postgres, Future Problems | Mike Stonebraker
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Run AlphaFold in ChimeraX for cryoEM model building
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Highly Accurate Protein Structure Prediction with AlphaFold | SimonKohl
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John Jumper: "Structure Prediction with AlphaFold"
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Introduction to Single Particle Data Analysis Using cryoSPARC
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The brilliance of AlphaFold 3
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How AI Cracked the Protein Folding Code and Won a Nobel Prize
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What Is AlphaFold? | NEJM
![[TALK 21] AlphaFold2: Uses and Applications – Clinton Lau - Biophysical Techniques Course 2022](https://i.ytimg.com/vi/-cIKAv4pOkM/hqdefault.jpg?sqp=-oaymwE9CNACELwBSFryq4qpAy8IARUAAAAAGAElAADIQj0AgKJDeAHwAQH4Af4JgALQBYoCDAgAEAEYKiBLKH8wDw==&rs=AOn4CLBB-RJ56pn97Gqn33FVouT_HdSKlA)
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[TALK 21] AlphaFold2: Uses and Applications – Clinton Lau - Biophysical Techniques Course 2022
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Running AlphaFold to Predict Protein Complexes from ChimeraX
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How to interpret AlphaFold structures
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how AlphaFold *actually* works
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Color a protein by C-alpha RMSD using ChimeraX
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How to color a protein by electrostatic potential with ChimeraX
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Compare AlphaFold and Experimental Protein Structures in ChimeraX
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