Implementing a SIR Disease Model in Python [1/2]

This video is part one of two (part two:    • Simulating the Zombie Apocalypse with Pyth...  ) on how one constructs simple compartmental models in epidemiology. I construct a set of ordinary differential equations (ODE) to solve the progression of an infectious disease in a given population. The set of ODEs are solved using the simplest of integrators, the Forward Euler method, in Python. This project is inspired by problems from Hans Petter Langtangen's book (https://amzn.to/31IWLCd) on Scientific Programming in Python. This is probably the best introductory text on scientific programming (even though it is written for Python 2). UPDATE Sep 2020 I have created a tutorial series on the ODESolver library that I start implementing in this video. Check it out here:    • ODESolver python library   Code for written in this video is here: https://github.com/gregwinther/youtube #SIRmodel #python #biomathematics Music: Lazy Days by Vanilla

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Simulating the Zombie Apocalypse with Python [2/2]
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Simulating the Zombie Apocalypse with Python [2/2]

The MATH of Pandemics | Intro to the SIR Model
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The MATH of Pandemics | Intro to the SIR Model

Simulating an epidemic
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Simulating an epidemic

The SIR Disease Model in PYTHON
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The SIR Disease Model in PYTHON

"Forecasting Infectious Disease Epidemics Using Dynamic Modeling: Ebola and Zika as Case Studies"
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"Forecasting Infectious Disease Epidemics Using Dynamic Modeling: Ebola and Zika as Case Studies"

How do mathematicians model infectious disease outbreaks?
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How do mathematicians model infectious disease outbreaks?

Oxford Mathematician explains SIR Disease Model for COVID-19 (Coronavirus)
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Oxford Mathematician explains SIR Disease Model for COVID-19 (Coronavirus)

What was Coding like 40 years ago?
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What was Coding like 40 years ago?

"Clean" Code, Horrible Performance
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"Clean" Code, Horrible Performance

Oxford Mathematician explains SIR Travelling Wave Disease Model for COVID-19 (Coronavirus)
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Oxford Mathematician explains SIR Travelling Wave Disease Model for COVID-19 (Coronavirus)

Math 3120, SIR model part I: estimating parameters from Italy
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Math 3120, SIR model part I: estimating parameters from Italy

Solving ODEs in Python 2: Forward Euler
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Solving ODEs in Python 2: Forward Euler

SIR Model For Disease Spread- 4. Python Implementation via coLaboratory Notebooks
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SIR Model For Disease Spread- 4. Python Implementation via coLaboratory Notebooks

Conway's Game of Life in Python
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Conway's Game of Life in Python

Coding Challenge 181: Weighted Voronoi Stippling
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Coding Challenge 181: Weighted Voronoi Stippling

CORONAVIRUS - An SEIR-model for CoVid19
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CORONAVIRUS - An SEIR-model for CoVid19

"Hello World" on Commodore 64 in Assembly Language, Machine Code
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"Hello World" on Commodore 64 in Assembly Language, Machine Code

An Introduction to Disease Modeling: Understanding COVID-19 Means Understanding Disease Modeling
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An Introduction to Disease Modeling: Understanding COVID-19 Means Understanding Disease Modeling

Brain Computer Interface w/ Python and OpenBCI for EEG data
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Brain Computer Interface w/ Python and OpenBCI for EEG data

SIR Model For Disease Spread- 3. Euler Integration in Spreadsheets
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SIR Model For Disease Spread- 3. Euler Integration in Spreadsheets