Slurm

Recorded training delivered on Zoom on 14 August 2024. Presenter: Dr. Kristen Finch; HPC Staff Scientist; Hyak Team This video covers: Hyak’s job scheduler Slurm Accounts and partitions on Hyak Interactive jobs Batch jobs Array jobs Using bash scripting to level up your Slurm usage Tutorial Materials: https://hyak.uw.edu/docs/hyak101/basi... Websites cited in the video include: Slurm official documentation: https://slurm.schedmd.com/documentati... Hyak Slurm docs: https://hyak.uw.edu/docs/compute/sche... Locator NN research article: https://elifesciences.org/articles/54507 Locator NN github repository: https://github.com/kr-colab/locator My github repository where the Dockerfile can be viewed: https://github.com/finchnSNPs/Docker_... DockerHub repository where the container can be downloaded: https://hub.docker.com/repository/doc... The article for the Populus trichocarpa dataset that was adapted for the exercises: https://onlinelibrary.wiley.com/doi/1... License information: Locator Neural Network is a copyright 2019 of C. J. Battey and released under a Non-Profit Open Software License 3.0 (NPOSL-3.0). Original Populus trichocarpa genotype data and locations are licensed under a CC0 1.0 Universal (CC0 1.0) Public Domain Dedication license. Original genotyping results available on DRYAD https://doi.org/10.5061/dryad.1051d.