The Cytoscape platform: Brief introduction to the graphical user interface and main functionality

A brief introduction to the Cytoscape platform for network analysis and visualization. I give a minimal overview of the user interface, data visualization, how to import your own data into Cytoscape, and a couple of selected apps from the app store. You may want to watch my short introduction to the core concepts of network biology first:    • Network biology: A short introduction to t...   0:00 Introduction: open source, network analysis, and network visualization 0:26 Graphical user interface: network view, table panel, and control panel 1:12 Visual styles: node/edge properties, default value, mapping types, and bypass 2:25 Data import: tabular files, import network, and import table 3:18 App store: free apps, add functionality, stringApp, and clusterMaker2 Hands-on exercises on Cytoscape and stringApp are available at https://jensenlab.org/training/string...