BioExcel Webinar #41: A walk through simulation parameter options (.mdp files) for GROMACS

Setting up biomolecular simulations with GROMACS requires a number of parameter choices. While some of them, like the number of simulation steps, are obvious, other options have less obvious meanings, yet impact simulation results or performance. In this webinar, we will look at the simulation parameters that are set in .mdp one by one, see how they are connect and how they affect scientific correctness and simulations performance.

BioExcel Webinar #42: What's new in GROMACS 2020
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BioExcel Webinar #42: What's new in GROMACS 2020

AlphaFold - The Most Useful Thing AI Has Ever Done
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AlphaFold - The Most Useful Thing AI Has Ever Done

BioExcel Webinar #24: Perspective on the Martini Force Field
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BioExcel Webinar #24: Perspective on the Martini Force Field

Bioexcel webinar #91: From Quick Script to Reproducible Workflow: Small Habits, Big Impact
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Bioexcel webinar #91: From Quick Script to Reproducible Workflow: Small Habits, Big Impact

Mini Hackathon - Build a Power App! [Full Course]
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Mini Hackathon - Build a Power App! [Full Course]

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Molecular Dynamics - chapter 3: Periodic Boundary Conditions, Temperature and Pressure

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Something is jamming GPS over Europe. Here's what we found

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6. Monte Carlo Simulation

Introduction to LAMMPS | Molecular Dynamics Made Easy
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Introduction to LAMMPS | Molecular Dynamics Made Easy

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How AI Cracked the Protein Folding Code and Won a Nobel Prize

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Web Scraping Using Python For Beginners and File Handling in Python | Python Web Scraping

Molecular Dynamics Siumlations with Gromacs
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Molecular Dynamics Siumlations with Gromacs

Webinar Demonstration - Molecular Dynamics Simulation of Protein-Ligand using Gromacs
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Webinar Demonstration - Molecular Dynamics Simulation of Protein-Ligand using Gromacs

BioExcel Webinar Series #1: Integrative modelling of biomolecular complexes with HADDOCK
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BioExcel Webinar Series #1: Integrative modelling of biomolecular complexes with HADDOCK

Support Vector Machines Part 1 (of 3): Main Ideas!!!
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Support Vector Machines Part 1 (of 3): Main Ideas!!!

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AI in the Biosciences: a UK-wide network, and some example projects from Nottingham

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What is SonarQube | Introduction SonarQube | SonarQube Tutorial | SonarQube Basics | Intellipaat

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Enhanced Sampling Methods - Chapter 2: Umbrella Sampling

Unlock the Secrets of MD Simulations Using Gromacs: From Theory to Application (Webnair)
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Unlock the Secrets of MD Simulations Using Gromacs: From Theory to Application (Webnair)

How to Start Coding | Programming for Beginners | Learn Coding | Intellipaat
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How to Start Coding | Programming for Beginners | Learn Coding | Intellipaat